Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911916.1_cds_XP_016461896.1_55174
CDS Infomation

[gene=LOC107785172] [db_xref=GeneID:107785172] [protein=auxin response factor 3-like] [protein_id=XP_016461896.1] [location=join(5416..5733,5901..5957,6352..6534,6642..6726,6808..6898,6972..7136,7849..7968,8083..8158,9397..9559,9710..10674)] [gbkey=CDS]
Sequence

ATGATGTGCGGACTTATTGATCTAAATACTGTGGATAACGATGACGTCGGAGAAGAAACG
ACGGCGCCGGTGTCACCAGCGTCATCGTCGACGGCGTCTGGATGTTCGGATTTGACGTCG
TCATCTCTGCCGGCGATGGCATCGGTTTGTCTGGAGCTGTGGCATGCGTGTGCTGGACCG
TTGATTTCTCTGCCGAAGAAAGGAAGTGCTGTTGTGTACCTACCTCAAGGTCACTTGGAA
CATCTCTCTGAGTACCCGCCCATAGCCTATAACCTCCCTCCTCACGTTTTTTGTCGCGTC
GTAGACGTGAAGCTACAAGCGGATGCGGCGAGTGATGAGGTCTATGCACAAGTCTCACTG
GTTCCAGACAATCAGCAGATTGAGCAGAAATGGAGGGATGGAGACATTGATGCAGATACT
GAAGAGGAGGAAATAGAAGGTGCTGGAAAATCAACAACACCACACATGTTCTGCAAGACT
CTCACTGCTTCGGATACCAGCACTCATGGCGGTTTTTCTGTCCCTCGCCGGGCTGCAGAA
GATTGCTTTCCTCCATTGGATTACAGACAACAGCGGCCCTCACAGGAGCTGGTAGCCAAA
GATCTACATGGTATCGAGTGGAAATTTCGGCATATCTATCGTGGTCAGCCACGAAGGCAT
CTGCTCACTACAGGATGGAGTGCGTTTGTAAACAGGAAGAAGCTTGTTTCTGGTGACGCT
GTGCTTTTCTTAAGGACTGCTGATGGAGAACTTAGGCTAGGGGTGAGACGAGCTGCCCAA
GCTAAAACATGTTCAAATTATCTAGCTGCCTATAGCCAACTGTTGAATGTCAGTGGTATT
GTGGATGTGGTTAAGGCCATATCTAGCACAAATGCCTTCAGTATCTGTTATAACCCGAGG
GCTAGCTCATCAGGCTTCATTTTACCTTACCACAAATTCTCAAAGACTCTTGCACATCCC
TTTTCAGCTGGAATGAGATTTAAGATGCGTGTCGAAACAGAAGATGCAGCTGAACAAAGG
TTCACTGGACTTGTTGTAGGAGTCAGCGATGTAGATCCAGTTCGCTGGCCTGGTTCTAAA
TGGAGGTGCCTATTGGTCAGGTGGGATGATCTTGATGTTTCTCGGCATAATAGGGTTTCA
CCGTGGGAAATTGAGCCATCTGGTTCAGCTCCTGTATCCAGCAGCTTGGTGATGCCTTCT
GCGAAGAGGACCAGGGTTGGCTTTCCAATTACAAAGGCCGATTTTCCAATTCCTAGAGAT
GGGATTGCAGTATCAGACTTTGGGGAATCTTCTAGGTTCCAGAAGGTCTTGCAAGGTCAA
GAAATTTTGGGGATTAGTTCTCCTTTTGTCGGTTTTGATGCTCACAGTCCTCGTACAGCG
GGGATAAGATGCTTTCCTGGTTTTCCTAGTTCTGGGGCATCTAGATTGGGAAACAGCATC
AGAACCCTGCTTGGTGACACAGACAAGTCCCCTGAAAGCATTGGCTTTAGTGATTCTTCT
CGATACAATAAGGTCTTGCAAGGTCAAGAAACTTTTTCAACCCCTCCTTATGGGAGAGGT
CATGCAGGTAGCCTAATGGAGGAAAAAAGTAGAACTGGTATTATCGTCGGTATTCAGGTT
CCAAGCCACGTAAACAGGTGGTCTGCTCCAAATCAGGGTAATCGCAGTCATTGCAATCCA
AGTACTCTTGTCCCGGCATCATCACCTCCTTCTGTGCTCAGCTTTCAGCCTCCCAGGTCT
CCAGCATCAAAATTCCAGGCTATGTTCAATCATAAACATGGGAAGCTTGAGACTGCTACC
CAGGCTTTGGATATGTCTGAGAGCTGTAGTAGGCATCTCGCATCTGGCTCACATGCCGAG
GACATCAGTAGGAAGGGAGACACAAAAGGAATCAGTTCTTTTAGTTTCTTAAAGGAGCAA
AAGCAAACAGGAATTTCATATCTTTCTCTTGGGACCCAGTCGTCTCAAAACTTAGTTTCC
ATGTGTAAAACCAGTTGCAGGATCTTTGGATTCCCCTTGACCGAGAGTAAAATAAATGCA
GCTAGAGCGGAGAATCCTGCCGAGGCTGTATATTCACATGGTCTAGAAACAACATTTCTG
CCTTCCAGTGATGGAAAGTTGCAGCCAGGGCCACCATTGATGACTAATGTTGTGGGAACA
AACTTTACTAAAGTAAATGACCTCTATGCTGCAAGAGATGTGATTCTTGATATTGCTTTG
TAG

Peptide Sequence

PEP ID

XP_016461896.1
PEP Infomation

PREDICTED: auxin response factor 3-like [Nicotiana tabacum]
Sequence

MMCGLIDLNTVDNDDVGEETTAPVSPASSSTASGCSDLTSSSLPAMASVCLELWHACAGP
LISLPKKGSAVVYLPQGHLEHLSEYPPIAYNLPPHVFCRVVDVKLQADAASDEVYAQVSL
VPDNQQIEQKWRDGDIDADTEEEEIEGAGKSTTPHMFCKTLTASDTSTHGGFSVPRRAAE
DCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKLVSGDA
VLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFSICYNPR
ASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVRWPGSK
WRCLLVRWDDLDVSRHNRVSPWEIEPSGSAPVSSSLVMPSAKRTRVGFPITKADFPIPRD
GIAVSDFGESSRFQKVLQGQEILGISSPFVGFDAHSPRTAGIRCFPGFPSSGASRLGNSI
RTLLGDTDKSPESIGFSDSSRYNKVLQGQETFSTPPYGRGHAGSLMEEKSRTGIIVGIQV
PSHVNRWSAPNQGNRSHCNPSTLVPASSPPSVLSFQPPRSPASKFQAMFNHKHGKLETAT
QALDMSESCSRHLASGSHAEDISRKGDTKGISSFSFLKEQKQTGISYLSLGTQSSQNLVS
MCKTSCRIFGFPLTESKINAARAENPAEAVYSHGLETTFLPSSDGKLQPGPPLMTNVVGT
NFTKVNDLYAARDVILDIAL

Transcript Sequence

Gene sequence data has not been registered.